Protein ZmALF19
ZmALF19 is a protein in the Alfin-like family.
Information
TF Name: ZmALF19
Species: Maize
TF Family: Alfin-like
Gene Name(Synonym): ALF19
Uniprot ID: B4FM57

Protein ZmALF19

ZmALF19 is a protein in the Alfin-like family.

Overview of domains present in v5 transcripts
Alfin-likePF00628PF12165
Zm00001eb094990_T002
Zm00001eb094990_T001
Zm00001eb094990_T003

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d005185DAPseq no logo sequence fimo position
Zm00001d005185DAPseq no logo sequence fimo position
Zm00001d005185ChIPseq no logo sequence fimo position
Zm00001d005185PChIPseq no logo sequence fimo position

Interactions where ZmALF19 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmALF19 is the target  
Expand


There are 94 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb094990_T002 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MAGPVSSAPRTVEDIYKDYAARRAGLVRALTSDVDGFYSMCDPEKENLCLYGLPNGGWEVSLPVEEVPPEMPEPALGINF
ARDGMRRRDWLSLVAVHSDAWLVSVAFFFAAKLNGNDRKRLFNMINDHPSVYEIMADRKGRENNPGVDNSSKSRHSTKRS
NDGKIKNSRVAVGECRYENDEDHSETLCGSCSGLYNSSEFWIGCDICERWFHGKCVRITPAKAEQIKHYKCPDCSYKKSR
Q

MAGPVSSAPRTVEDIYKDYAARRAGLVRALTSDVDGFYSMCDPEKENLCLYGLPNGGWEVSLPVEEVPPEMPEPALGINF
ARDGMRRRDWLSLVAVHSDAWLVSVAFFFAAKLNGNDRKRLFNMINDHPSVYEIMADRKGRENNPGVDNSSKSRHSTKRS
NDGKIKNSRVAVGECRYENDEDHSETLCGSCSGLYNSSEFWIGCDICERWFHGKCVRITPAKAEQIKHYKCPDCSYKKSR
Q

MAGPVSSAPRTVEDIYKDYAARRAGLVRALTSDVDGFYSMCDPEKENLCLYGLPNGGWEVSLPVEEVPPEMPEPALGINF
ARDGMRRRDWLSLVAVHSDAWLVSVAFFFAAKLNGNDRKRLFNMINDHPSVYEIMADRKGRENNPGVDNSSKSRHSTKRS
NDGKIKNSRVAVGECRYENDEDHSETLCGSCSGLYNSSEFWIGCDICERWFHGKCVRITPAKAEQIKHYKCPDCSYKKSR
Q

MAGPVSSAPRTVEDIYKDYAARRAGLVRALTSDVDGFYSMCDPEKENLCLYGLPNGGWEVSLPVEEVPPEMPEPALGINF
ARDGMRRRDWLSLVAVHSDAWLVSVAFFFAAKLNGNDRKRLFNMINDHPSVYEIMADRKGRENNPGVDNSSKSRHSTKRS
NDGKIKNSRVAVGECRYENDEDHSETLCGSCSGLYNSSEFWIGCDICERWFHGKCVRITPAKAEQIKHYKCPDCSYKKSR
Q

MAGPVSSAPRTVEDIYKDYAARRAGLVRALTSDVDGFYSMCDPEKENLCLYGLPNGGWEVSLPVEEVPPEMPEPALGINF
ARDGMRRRDWLSLVAVHSDAWLVSVAFFFAAKLNGNDRKRLFNMINDHPSVYEIMADRKGRENNPGVDNSSKSRHSTKRS
NDGKIKNSRVAVGECRYENDEDHSETLCGSCSGLYNSSEFWIGCDICERWFHGKCVRITPAKAEQIKHYKCPDCSYKKSR
Q

MAGPVSSAPRTVEDIYKDYAARRAGLVRALTSDVDGFYSMCDPEKENLCLYGLPNGGWEVSLPVEEVPPEMPEPALGINF
ARDGMRRRDWLSLVAVHSDAWLVSVAFFFAAKLNGNDRKRLFNMINDHPSVYEIMADRKGRENNPGVDNSSKSRHSTKRS
NDGKIKNSRVAVGECRYENDEDHSETLCGSCSGLYNSSEFWIGCDICERWFHGKCVRITPAKAEQIKHYKCPDCSYKKSR
Q

MAGPVSSAPRTVEDIYKDYAARRAGLVRALTSDVDGFYSMCDPEKENLCLYGLPNGGWEVSLPVEEVPPEMPEPALGINF
ARDGMRRRDWLSLVAVHSDAWLVSVAFFFAAKLNGNDRKRLFNMINDHPSVYEIMADRKGRENNPGVDNSSKSRHSTKRS
NDGKIKNSRVAVGECRYENDEDHSETLCGSCSGLYNSSEFWIGCDICERWFHGKCVRITPAKAEQIKHYKCPDCSYKKSR
Q

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF12165
PF00628
Alfin-like
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard
     
Expand

AGGAACTAACGGGAACGGAGCCAGA...

GRMZM2G047316_T01 from maize genome v3


Related TFome: pUT6622

Amino Acid Sequence
Copy to clipboard

MAGPVSSAPRTVEDIYKDYAARRAGLVRALTSDVDGFYSMCDPEKENLCLYGLPNGGWEVSLPVEEVPPEMPEPALGINF
ARDGMRRRDWLSLVAVHSDAWLVSVAFFFAAKLNGNDRKRLFNMINDHPSVYEIMADRKGRENNPGVDNSSKSRHSTKRS
NDGKIKNSRVAVGECRYENDEDHSETLCGSCSGLYNSSEFWIGCDICERWFHGKCVRITPAKAEQIKHYKCPDCSYKKSR
Q

Nucleotide Sequence
Copy to clipboard
     
Expand

ATGACGGGCGGTGTCAGACCTCTGA...

GRMZM2G047316_T02 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MCDPEKENLCLYGLPNGGWEVSLPVEEVPPEMPEPALGINFARDGMRRRDWLSLVAVHSDAWLVSVAFFFAAKLNGNDRK
RLFNMINDHPSVYEIMADRKGRENNPGVDNSSKSRHSTKRSNDGKIKNSRVAVGECRYENDEDHSETLCGSCSGLYNSSE
FWIGCDICERWFHGKCVRITPAKAEQIKHYKCPDCSYKKSRQ

Nucleotide Sequence
Copy to clipboard
     
Expand

GACGGCGGAGGTGCGCCCCGGACCG...

Zm00001d005185_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MAGPVSSAPRTVEDIYKDYAARRAGLVRALTSDVDGFYSMCDPEKENLCLYGLPNGGWEVSLPVEEVPPEMPEPALGINF
ARDGMRRRDWLSLVAVHSDAWLVSVAFFFAAKLNGNDRKRLFNMINDHPSVYEIMADRKGRENNPGVDNSSKSRHSTKRS
NDGKIKNSRVAVGECRYENDEDHSETLCGSCSGLYNSSEFWIGCDICERWFHGKCVRITPAKAEQIKHYKCPDCSYKKSR
Q

Nucleotide Sequence
Copy to clipboard
     
Expand

AGAACCAGAACCAGAACCCCCCCGC...

Zm00001d005185_T002 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MAGPVSSAPRTVEDIYKDYAARRAGLVRALTSDVDGFYSMCDPGNTGSDLSRSALVALLRSCLCLGFGSLTGFLGVRAEK
ENLCLYGLPNGGWEHATFLFIRKRLFNMINDHPSVYEIMADRKGRENNPGVDNSSKSRHSTKRSNDGKIKNSRVAVGECR
YENDEDHSETLCGSCSGLYNSSEFWIGCDICERWFHGKCVRITPAKAEQIKHYKCPDCSYKKSRQ

Nucleotide Sequence
Copy to clipboard
     
Expand

AGAACCAGAACCAGAACCCCCCCGC...

Zm00001eb094990_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MAGPVSSAPRTVEDIYKDYAARRAGLVRALTSDVDGFYSMCDPGNTGSDLSRSALVALLRSCLCLGFGSLTGFLGVRAEK
ENLCLYGLPNGGWEVSLPVEEVPPEMPEPALGINFARDGMRRRDWLSLVAVHSDAWLVSVAFFFAAKLNGNDREGRIILV
LITAANPGTQRSDQMMER

Nucleotide Sequence
Copy to clipboard
     
Expand

GTTGGAGCAGAATGGGAGTGGGGGA...

Zm00001eb094990_T003 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MAGPVSSAPRTVEDIYKDYAARRAGLVRALTSDVDGFYSMCDPEKENLCLYGLPNGGWEVSLPVEEVPPEMPEPALGINF
ARDGMRRRDWLSLVAVHSDAWLVSVAFFFAAKLNGNDRKRLFNMINDHPSVYEIMADRKGRENNPGVDNSSKSRHSTKV

Nucleotide Sequence
Copy to clipboard
     
Expand

CGGAGGCGTCTCCCAGCCCCGCGCC...


Copyright © 2023 Grassius.org | Last updated: 2023-06-26